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bigmem | 2 80 3000000 fm[1-2] | 1 40 8256000 a100:2 mmg2

===Training Session 2: Introduction to job scheduling === ...ursday, 2024-05-16, 9:00 am - 10:30 pm ('''1.5 hours'''). Training session 2. '''Introduction to job scheduling.''' Tannistha Nandi

bigmem | 2 80 3000000 fm[1-2] | 1 40 8256000 a100:2 mmg2

cpu2022-bf24 | 16 0 0 2 13 0 1 gpu-a100 | 5 2 0 0 1 0 2

=== Example 2, two GPUs on one node === '''2 A100 GPU''', '''8 CPUs''' and '''64 GB''' of RAM for '''2 hour'''.

Please take 2 minutes to complete this survey to help us target sessions which would help

! colspan="2" |June 10 ! colspan="2" |June 11

|Level 1 & 2 (ARC), Level 3 & 4 (MARC) |Level 1 & 2 only

...ets. Each socket has an Intel Xeon Gold 6148 20-core processor, running at 2.4 GHz. The 40 cores on the individual compute nodes share about 190 GB of ...ets. Each socket has an Intel Xeon Gold 6148 20-core processor, running at 2.4 GHz. The 40 cores on the individual compute nodes share about 750 GB of R

#SBATCH --time=2:0:0 Time Limit: 2:00:00

pytorch 2.1.2 cpu_mkl_py39h9c325db_100 conda-forge pytorch 2.1.2 cuda112_py310hb684afd_301 conda-forge

...vens baking 24 loaves of bread in the time it would take one baker to bake 2

...tions or applications requiring a very fast disk access (16 CPU cores at 3.2 GHz, 256 GB of RAM, 5.8 TB fast SSD based local disk). ...ides access the 2 big memory compute nodes (c10 and c11) with 64 cores and 2 TB of RAM each.

| date = 2023/03/2 | date = 2023/03/2

! colspan="2" | GPFS ! colspan="2" | Tiered

* TALC is configured for Level 1 and Level 2 data as set forth in the [https://www.ucalgary.ca/legal-services/sites/defa

drwxr-xr-x 2 drozmano drozmano 4096 Jan 20 2023 com drwxr-xr-x 2 drozmano drozmano 4096 Jan 20 2023 extend

espresso/6.3-gnu espresso/7.2 * '''espresso/7.2''', QE v7.2 was released on 31 March 2023.

...ets. Each socket has an Intel Xeon Gold 6148 20-core processor, running at 2.4 GHz. ...ts. Each socket has an Intel Xeon Gold 6148 20-core processor, running at 2.4 GHz.

...here are two ways to address a file, (1) using a '''relative path''', and (2) using '''absolute path'''.

...ave been obtained on some example system that runs for about 10 minutes on 2 full compute nodes of the '''cpu2019''' partition. cpu2019 2 80 9:13 2024r1

(2) how it is explained on the Tensorflow site, using <code>pip</code>. tensorflow 2.14.0 cpu_py39h4655687_0 conda-forge

-------------- /global/software/Modules/3.2.10/modulefiles ---------------- ...ster you have to have two files: (1) a Gaussian '''.com''' input file and (2) SLURM job script '''.slurm'''.

Swap: 7.9Gi 4.9Gi 2.9Gi ...ontroller: Intel Corporation 8 Series/C220 Series Chipset Family USB EHCI #2 (rev 04)

* Rev.com has been cleared by IT for Level 2 data.

-rw-rw-r-- 1 username username 2.4G Feb 3 10:13 A.csv -rw-rw-r-- 1 username username 2.4G Feb 3 10:16 B.csv

total 2.4G -rw-rw-r-- 1 username1 somepi_lab 2.4G Feb 3 10:13 A.csv

# This infrastructure is only rated to handle Level 1 and Level 2 data. Please see [https://www.ucalgary.ca/legal-services/university-legal-s

R version 4.2.0 (2022-04-22) -- "Vigorous Calisthenics" 2: Setting LC_COLLATE failed, using "C"

-rwxr-xr-x 1 drozmano drozmano 6402535424 Oct 3 15:31 freesurfer-7.3.2.sif ...you want to use the container with Freesurfer 7.3.2, <code>freesurfer-7.3.2.sif</code>,

...uld submit the initial list of @ucalgary.ca accounts needed for the course 2 weeks before the start date. |16 cores, 2x Eight-Core Intel Xeon CPU E5-2650 @ 2.00GHz (2012)

...es long, please '''pack several''' of those computations into longer jobs, 2-3 hours long. For example, if you have 200000 jobs that ran for 30 seconds,

-rw-r--r-- 1 username somepi_lab 2.4G Feb 3 10:13 A.csv -rw-r--r-- 1 otheruser somepi_lab 2.4G Feb 3 10:16 B.csv

...rage provided by the ARC cluster is only suitable for '''Level 1 and Level 2 data''', as classified according to

| Level 2 | Level 1 - 2

$ module load R/3.6.2 R version 3.6.2 (2019-12-12) -- "Dark and Stormy Night"

...e> field of the request. Modifying the request to ask for 10min instead of 2 hours for this task would be entirely reasonable in this case. We will disc #SBATCH --time=2:0:0

----------- /global/software/Modules/3.2.10/modulefiles --------- (2) a SLURM job script '''.slurm'''.

| rowspan="2" | TALC | rowspan="2" | All TALC users

$ matlab -batch "my_code(1, 2, 3)" y(1:np)=pi/2.0;

2 gpu-v100 DenyOnLimit cpu=80,gpu=4 1-00:00:00 cpu=160,gpu=8...

* Untar Linux kernel (~39000 files): 2:30 (m:ss)

...rom ARC cluster (collection 1) to Compute Canada cedar cluster (collection 2) * Next, for Compute Canada cedar data transfer node choose 'collection 2' as '''computecanada#cedar-dtn''' from the drop down menu.

...emises. It is ideal for short-term projects that involve level 1 and level 2 data. Please refer to our [[CloudStack End User Agreement]] for acceptable ...for your VM, you may choose to override the size of your root disk in step 2 and select 'No thanks' in this step.

g1-g8 Two 2.4 GHz Intel Xeon CPU 20 250000 Four GeForce GTX 1080 Ti (Pa g9-g24 Two 2.1 GHz Intel Xeon CPU 16 62000 Four GeForce GTX 1080 Ti (Pa

b. Example 2:  The following command requests for 1 GPU to be used from 1 node belongin | 16 cores, 2x Intel(R) Xeon(R) CPU E5620 @ 2.40GHz (Westmere, 2010)

...y. Generally, a single thread will run on 1 core, two threads will run on 2 cores and so on. ...ller chunks. Here we have used a python-based tool called ‘fastqsplitter 1.2.0’ (https://pypi.org/project/fastqsplitter/) to split up the fastq file

The supported version is '''2.1.3'''. cesm/2.1.1 cesm/2.1.3

* CUDA updated, from 10.2 to 11.1 | attr || 2.4.46 || 2.4.48