SignalP

General

• Web Site: https://services.healthtech.dtu.dk/services/SignalP-6.0/

It is a licensed software. One has to agree to the academic license conditions before the download link will be provided.

Installation

First, you have to install your own conda, following this:

Once you have it installed, activate your Conda. Please note that this should be the Miniforge3 install that uses conda-forge channel by default:

$ source ~/software/init-conda

Then create a new environment and activate it too:

(base) $ conda create -n signalp6 python=3.11 pip pillow numpy matplotlib tqdm pytorch=1.13
....

(base) $ conda activate signalp6

Download and unpack the installation archive. You have to use the link send to you by email:

(signalp6) $ wget https://services.healthtech.dtu.dk/download/29d.............7e/signalp-6.0h.fast.tar.gz
(signalp6) $ tar xfv signalp-6.0h.fast.tar.gz 

Change to the software directory and install it with pip:

(signalp6) $ cd signalp6_fast/signalp-6-package
(signalp6) $ pip install .
....

Check if it works:

(signalp6) $ $ signalp6 --version
SignalP 6.0 Signal peptide prediction tool 6.0h

Success.

Links

ARC Software