User contributions for Tannistha.nandi
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8 June 2021
- 22:1422:14, 8 June 2021 diff hist +12 Bioinformatics applications →Performance evaluation
- 22:1422:14, 8 June 2021 diff hist +29 N File:Fastqc performance.png No edit summary current
- 22:1122:11, 8 June 2021 diff hist 0 Bioinformatics applications →1. FastQC Tag: Visual edit
- 22:0922:09, 8 June 2021 diff hist 0 Bioinformatics applications →1. FastQC
- 21:4921:49, 8 June 2021 diff hist +101 Bioinformatics applications →Strategy to speed up the fastqc runtime
- 21:4721:47, 8 June 2021 diff hist +3 Bioinformatics applications →Strategy to speed up the fastqc runtime
- 21:4621:46, 8 June 2021 diff hist +2 Bioinformatics applications →1. FastQC
- 19:3919:39, 8 June 2021 diff hist −2 Bioinformatics applications →Performance evaluation
- 19:3419:34, 8 June 2021 diff hist +5 Bioinformatics applications →2. BWA (Burrows-Wheeler Aligner)
- 19:3419:34, 8 June 2021 diff hist +6 Bioinformatics applications →1. FastQC
- 19:3419:34, 8 June 2021 diff hist −2 Bioinformatics applications →2. BWA (Burrows-Wheeler Aligner)
- 19:3319:33, 8 June 2021 diff hist +328 Bioinformatics applications →2. BWA (Burrows-Wheeler Aligner)
- 19:3219:32, 8 June 2021 diff hist +34 Bioinformatics applications →Strategies to write efficient bioinformatics workflows for the ARC high performance computing (HPC) cluster
- 19:3119:31, 8 June 2021 diff hist +45 Bioinformatics applications →Strategy to speed up the fastqc runtime
- 19:2519:25, 8 June 2021 diff hist +6 Bioinformatics applications →FastQC Tag: Visual edit
- 19:2519:25, 8 June 2021 diff hist +513 Bioinformatics applications →Performance evaluation
- 19:2419:24, 8 June 2021 diff hist +6 Bioinformatics applications →Performance evaluation
- 19:2219:22, 8 June 2021 diff hist +28 Bioinformatics applications →Performance evaluation
- 19:2219:22, 8 June 2021 diff hist +22 N File:Fastqc.png No edit summary current
- 19:0619:06, 8 June 2021 diff hist +17 Bioinformatics applications →Strategy to speed up the fastqc runtime
- 19:0419:04, 8 June 2021 diff hist +10 Bioinformatics applications →Strategy to speed up the fastqc runtime
- 19:0319:03, 8 June 2021 diff hist +10 Bioinformatics applications →Strategy to speed up the fastqc runtime
- 19:0219:02, 8 June 2021 diff hist +730 Bioinformatics applications →Strategy to speed up the fastqc runtime
- 18:5818:58, 8 June 2021 diff hist −1 Bioinformatics applications →Strategy to speed up the fastqc runtime
- 18:5718:57, 8 June 2021 diff hist −5 Bioinformatics applications →Strategies to write efficient bioinformatics workflows for the ARC high performance computing (HPC) cluster
- 18:5718:57, 8 June 2021 diff hist +52 N File:ARC ClusterV3.png No edit summary current
- 18:5018:50, 8 June 2021 diff hist −3 Bioinformatics applications →Strategy to speed up the fastqc runtime
- 06:0806:08, 8 June 2021 diff hist +13 Bioinformatics applications →Strategies to write efficient bioinformatics workflows for the ARC high performance computing (HPC) cluster
- 06:0706:07, 8 June 2021 diff hist +725 Bioinformatics applications →Strategy to speed up the fastqc runtime
- 06:0506:05, 8 June 2021 diff hist +11 Bioinformatics applications →Strategy to speed up the fastqc runtime
- 06:0406:04, 8 June 2021 diff hist +623 Bioinformatics applications →Strategy to speed up the fastqc runtime
- 06:0106:01, 8 June 2021 diff hist +1,804 Bioinformatics applications →FastQC
- 05:5905:59, 8 June 2021 diff hist +399 Bioinformatics applications →FastQC
- 05:5405:54, 8 June 2021 diff hist +1,532 Bioinformatics applications →FastQC
- 05:4205:42, 8 June 2021 diff hist −4 Bioinformatics applications →FastQC
- 05:4105:41, 8 June 2021 diff hist +544 Bioinformatics applications →FastQC
- 05:3905:39, 8 June 2021 diff hist −10 Bioinformatics applications /* The ARC cluster offers a variety of hardware gears to suit the requirements of any workflow. As a first step, review the compute resources on the ARC cluster (weblink). It will facilitate the process of choosing the appropriate partition depending on the nature of the workflow. For example, choose the gpu-v100 partition for GPU accelerators or the bigmem partition for a memory intensive workflow. Each partition has multiple compute nodes with similar hardware specifications. The illustrati...
- 05:3805:38, 8 June 2021 diff hist −11 Bioinformatics applications →One of the challenges to deal with big genomics data set is their long runtimes. The effective and efficient use of the computing resources on the Advanced Research Computing (ARC) cluster can speed up the runtimes.
- 05:3705:37, 8 June 2021 diff hist +466 Bioinformatics applications →Strategies to write efficient bioinformatics workflows for the ARC high performance computing (HPC) cluster
- 05:3405:34, 8 June 2021 diff hist −5 Bioinformatics applications →Strategies to write efficient bioinformatics workflows for the ARC high performance computing (HPC) cluster
- 05:3305:33, 8 June 2021 diff hist +57 Bioinformatics applications No edit summary
- 05:3105:31, 8 June 2021 diff hist +82 N File:ARC ClusterV2.png No edit summary current
- 05:2705:27, 8 June 2021 diff hist +1,233 N Bioinformatics applications Created page with "== Strategies to write efficient bioinformatics workflows for the ARC high performance computing (HPC) cluster == ===== One of the challenges to deal with big genomics data..."
- 05:2205:22, 8 June 2021 diff hist +35 RCS Home Page →Software pages
28 May 2021
- 03:0903:09, 28 May 2021 diff hist +6 RCS Software Management Group →Topics Discussed
- 03:0703:07, 28 May 2021 diff hist −19 RCS Software Management Group →Topics to discuss
- 03:0603:06, 28 May 2021 diff hist +17 RCS Software Management Group →Topics to discuss
- 03:0503:05, 28 May 2021 diff hist +23 RCS Software Management Group →Topics to discuss
- 03:0503:05, 28 May 2021 diff hist +477 RCS Software Management Group →Topics to discuss
21 May 2021
- 15:2315:23, 21 May 2021 diff hist −842 List of courses on TALC No edit summary