Fmriprep on ARC: Difference between revisions
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(Created page with "= General = = Using on ARC = <pre> $ singularity run /global/software/fmriprep/containers/fmriprep-20.2.3.simg --help You are using fMRIPrep-20.2.3, and a newer version of...") |
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= General = | = General = | ||
'''fMRIPrep''': fMRI PREProcessing workflows | |||
Currently we have two singularity containers: | |||
<pre> | |||
$ ls -l /global/software/fmriprep/containers/ | |||
-rwxr-xr-x 1 ian.percel ian.percel 4842659840 Jul 27 2021 fmriprep-20.2.3.simg | |||
-rwxr-xr-x 1 drozmano drozmano 3724558336 Sep 20 08:51 fmriprep-22.0.1.simg | |||
</pre> | |||
= Using on ARC = | = Using on ARC = | ||
Revision as of 15:06, 20 September 2022
General
fMRIPrep: fMRI PREProcessing workflows
Currently we have two singularity containers:
$ ls -l /global/software/fmriprep/containers/ -rwxr-xr-x 1 ian.percel ian.percel 4842659840 Jul 27 2021 fmriprep-20.2.3.simg -rwxr-xr-x 1 drozmano drozmano 3724558336 Sep 20 08:51 fmriprep-22.0.1.simg
Using on ARC
$ singularity run /global/software/fmriprep/containers/fmriprep-20.2.3.simg --help You are using fMRIPrep-20.2.3, and a newer version of fMRIPrep is available: 21.0.2. Please check out our documentation about how and when to upgrade: https://fmriprep.readthedocs.io/en/latest/faq.html#upgrading usage: fmriprep [-h] [--version] [--skip_bids_validation] ....