Freesurfer on ARC: Difference between revisions
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Freesurfer is a collection of neuroimaging software that can be used to process Magnetic Resonance Imaging files like DICOMs and NIFTIs. Detailed documentation can be found on the [ https://surfer.nmr.mgh.harvard.edu/ Freesurfer website] | Freesurfer is a collection of neuroimaging software that can be used to process Magnetic Resonance Imaging files like DICOMs and NIFTIs. Detailed documentation can be found on the [https://surfer.nmr.mgh.harvard.edu/ Freesurfer website] | ||
Most simple workflows that are scalable on ARC use recon-all to perform a reconstruction of the MRI image from the collection of slices. This is done by parallelizing over scans or subjects. | Most simple workflows that are scalable on ARC use recon-all to perform a reconstruction of the MRI image from the collection of slices. This is done by parallelizing over scans or subjects. | ||
Revision as of 17:28, 4 October 2021
Freesurfer is a collection of neuroimaging software that can be used to process Magnetic Resonance Imaging files like DICOMs and NIFTIs. Detailed documentation can be found on the Freesurfer website
Most simple workflows that are scalable on ARC use recon-all to perform a reconstruction of the MRI image from the collection of slices. This is done by parallelizing over scans or subjects.