https://rcs.ucalgary.ca/index.php?title=Special:NewPages&feed=atom&limit=50&offset=&namespace=0&username=&tagfilter=&size-mode=max&size=0RCSWiki - New pages [en]2024-03-29T15:40:36ZFrom RCSWikiMediaWiki 1.39.6https://rcs.ucalgary.ca/ARC_Account_DeactivationARC Account Deactivation2024-03-28T21:45:50Z<p>Lleung: Created page with "Research Computing Services has identified your account as being inactive for more than 1 year and is subject to deactivation. If you intend to keep your ARC account active, please complete the form. Survey: https://forms.office.com/Pages/ResponsePage.aspx?id=7KAJxuOlMUaWhhkigL2RUYRT1Hf69QZFtxYPy8rvtBRUNjNUVEZQMkpTVk8wNFlHUjVZRTBCMlhWRiQlQCN0PWcu {{#externalredirect: https://forms.office.com/Pages/ResponsePage.aspx?id=7KAJxuOlMUaWhhkigL2RUYRT1Hf69QZFtxYPy8rvtBRUNjNUVE..."</p>
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<div>Research Computing Services has identified your account as being inactive for more than 1 year and is subject to deactivation.<br />
<br />
If you intend to keep your ARC account active, please complete the form.<br />
<br />
Survey: https://forms.office.com/Pages/ResponsePage.aspx?id=7KAJxuOlMUaWhhkigL2RUYRT1Hf69QZFtxYPy8rvtBRUNjNUVEZQMkpTVk8wNFlHUjVZRTBCMlhWRiQlQCN0PWcu<br />
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{{#externalredirect: https://forms.office.com/Pages/ResponsePage.aspx?id=7KAJxuOlMUaWhhkigL2RUYRT1Hf69QZFtxYPy8rvtBRUNjNUVEZQMkpTVk8wNFlHUjVZRTBCMlhWRiQlQCN0PWcu}}</div>Lleunghttps://rcs.ucalgary.ca/BiocondaBioconda2024-03-21T16:25:33Z<p>Dmitri: /* General */</p>
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<div>= General =<br />
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* Home page: https://bioconda.github.io/index.html<br />
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* List of available packages: https://bioconda.github.io/conda-package_index.html<br />
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= Bioconda on ARC =<br />
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== Available modules ==<br />
To activate<br />
<pre><br />
$ module avail bioconda<br />
-------------------- /global/software/Modules/4.6.0/modulefiles -----------------<br />
bioconda/2018.11 bioconda/conda3 <br />
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$ module load biconda/2018.11<br />
Loading bioconda/2018.11<br />
Loading requirement: bioconda/conda3<br />
</pre><br />
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Check software<br />
<pre><br />
$ samtools --version<br />
samtools 1.9<br />
Using htslib 1.9<br />
Copyright (C) 2018 Genome Research Ltd.<br />
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$ salmon --version<br />
salmon 0.11.3<br />
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$ kraken --version<br />
Kraken version 0.10.6-unreleased<br />
Copyright 2013-2015, Derrick Wood (dwood@cs.jhu.edu)<br />
</pre><br />
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Get the list of installed packages:<br />
<pre><br />
$ conda list<br />
....<br />
....<br />
</pre><br />
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= Links =<br />
[[ARC Software pages]]</div>Dmitrihttps://rcs.ucalgary.ca/RCS_Summer_School_2024_SurveyRCS Summer School 2024 Survey2024-03-05T21:35:21Z<p>Lleung: Created page with "Research Computing Services is planning to run a 3 day in-person event on campus ("The RCS Summer School") between June 10-12, 2024 to help empower researchers like you currently using our infrastructure. This event will host various 1-3 hour sessions and hands-on workshops covering various topics, with focus on topics that most interest our researchers. You may pick and choose to attend any number of these sessions throughout this event for free. Please take 2 minutes..."</p>
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<div>Research Computing Services is planning to run a 3 day in-person event on campus ("The RCS Summer School") between June 10-12, 2024 to help empower researchers like you currently using our infrastructure. This event will host various 1-3 hour sessions and hands-on workshops covering various topics, with focus on topics that most interest our researchers. You may pick and choose to attend any number of these sessions throughout this event for free.<br />
<br />
Please take 2 minutes to complete this survey to help us target sessions which would help enhance your research.<br />
<br />
Survey: https://forms.office.com/Pages/ResponsePage.aspx?id=7KAJxuOlMUaWhhkigL2RUcIYTwiXbi5NnglJOLr1trhUQTZLQzZYWTVHT0xDQVJZSkQ2VjNPVkNMSC4u<br />
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