Freesurfer on ARC: Difference between revisions
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Freesurfer is a collection of neuroimaging software that can be used to process Magnetic Resonance Imaging files like DICOMs and NIFTIs. Detailed documentation can be found on the | Freesurfer is a collection of neuroimaging software that can be used to process Magnetic Resonance Imaging files like DICOMs and NIFTIs. Detailed documentation can be found on the [ https://surfer.nmr.mgh.harvard.edu/ Freesurfer website] | ||
Most simple workflows that are scalable on ARC use recon-all to perform a reconstruction of the MRI image from the collection of slices. This is done by parallelizing over scans or subjects. | Most simple workflows that are scalable on ARC use recon-all to perform a reconstruction of the MRI image from the collection of slices. This is done by parallelizing over scans or subjects. | ||
Revision as of 17:28, 4 October 2021
Freesurfer is a collection of neuroimaging software that can be used to process Magnetic Resonance Imaging files like DICOMs and NIFTIs. Detailed documentation can be found on the [ https://surfer.nmr.mgh.harvard.edu/ Freesurfer website]
Most simple workflows that are scalable on ARC use recon-all to perform a reconstruction of the MRI image from the collection of slices. This is done by parallelizing over scans or subjects.