Difference between revisions of "Fmriprep on ARC"

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(Created page with "= General = = Using on ARC = <pre> $ singularity run /global/software/fmriprep/containers/fmriprep-20.2.3.simg --help You are using fMRIPrep-20.2.3, and a newer version of...")
 
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= General =
 
= General =
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'''fMRIPrep''': fMRI PREProcessing workflows
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Currently we have two singularity containers:
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<pre>
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$ ls -l /global/software/fmriprep/containers/
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-rwxr-xr-x 1 ian.percel ian.percel 4842659840 Jul 27  2021 fmriprep-20.2.3.simg
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-rwxr-xr-x 1 drozmano  drozmano  3724558336 Sep 20 08:51 fmriprep-22.0.1.simg
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</pre>
  
 
= Using on ARC =
 
= Using on ARC =

Revision as of 15:06, 20 September 2022

General

fMRIPrep: fMRI PREProcessing workflows

Currently we have two singularity containers:

$ ls -l /global/software/fmriprep/containers/

-rwxr-xr-x 1 ian.percel ian.percel 4842659840 Jul 27  2021 fmriprep-20.2.3.simg
-rwxr-xr-x 1 drozmano   drozmano   3724558336 Sep 20 08:51 fmriprep-22.0.1.simg

Using on ARC

$ singularity run /global/software/fmriprep/containers/fmriprep-20.2.3.simg --help

You are using fMRIPrep-20.2.3, and a newer version of fMRIPrep is available: 21.0.2.
Please check out our documentation about how and when to upgrade:
https://fmriprep.readthedocs.io/en/latest/faq.html#upgrading
usage: fmriprep [-h] [--version] [--skip_bids_validation]
....